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User guide

Contents
1	Introduction
2	Overview
3	Bayesian vs Frequentist methods
4	Fixed pool size and perfect tests
5	Fixed pool size and known Se & Sp
6	Fixed pool size and uncertain Se & Sp
7	Variable pool size and perfect tests
8	Pooled prevalence using a Gibbs sampler
9	True prevalence using one test
10	Estimated true prevalence using two tests with a Gibbs sampler
11	Estimation of parameters for prior Beta distributions
12	Sample size for fixed pool size and perfect test
13	Sample size for fixed pool size and known test sensitivity and specificity
14	Sample size for fixed pool size and uncertain test sensitivity and specificity
15	Simulate sampling for fixed pool size
16	Simulate sampling for variable pool sizes
17	Important Assumptions
18	Pooled prevalence estimates are biased!

Contents